PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0079s0143.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 231aa    MW: 25994.7 Da    PI: 6.2402
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0079s0143.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.91.6e-26127185159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYG+K+ k++++ r+YY+Cts gC+vkk ver  ed ++v++ Y g H+he
  Kaladp0079s0143.1.p 127 LDDGYRWRKYGKKPLKNNPNLRNYYKCTSGGCQVKKIVERWIEDSSYVITQYDGVHTHE 185
                          59********************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-28114186IPR003657WRKY domain
SuperFamilySSF1182907.85E-25120185IPR003657WRKY domain
PROSITE profilePS5081126.968122187IPR003657WRKY domain
SMARTSM007748.4E-30127186IPR003657WRKY domain
PfamPF031065.7E-20128185IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MDLYSLENPN PSLDLYIDVD DYSLSQFDCF FLNELSNYEA GYGFIGGAEK DQSSYTSSPA  60
VTSPPEKVSR SEQDPLLLVQ MLVSGGASSS TNAAVNVMRN EGKRKMQGDG PKPQRVAFKT  120
KSKLDVLDDG YRWRKYGKKP LKNNPNLRNY YKCTSGGCQV KKIVERWIED SSYVITQYDG  180
VHTHESSCSY YYDNNNNHHL QGVTATDYYH CQNDDNTYIP SAAETKVHLK *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-21117185775Probable WRKY transcription factor 4
2lex_A6e-21117185775Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ93WU97e-36WRK51_ARATH; Probable WRKY transcription factor 51
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.17e-25WRKY DNA-binding protein 51